MEASURES OF RIVER-FLOODPLAIN CONNECTIVITY I: ISOLATED BACKWATERS IN SELECTED REACHES OF THE UPPER MISSISSIPPI RIVER. Kenneth S. Lubinski1 and Jeffrey A. Yanke1,2. 1U.S. Geological Survey, Upper Midwest Environmental Sciences Center, La Crosse, WI 54602 2University of Wisconsin-La Crosse, La Crosse, WI 54601. River-floodplain connectivity has been reported as influencing material transport and loading, animal movements, plant colonization, biodiversity, and production within many large river ecosystems, and consequently was recently described as one of six important criteria for evaluating Upper Mississippi River ecosystem health. Surprisingly little attention, however, has been devoted to developing quantitative methods for measuring river-floodplain connectivity, or correlating resultant values to physical, hydrologic or biological conditions. To initiate a long-term science strategy on the ecological relevance of river-floodplain connectivity, and in the absence of detailed floodplain elevation information, we focused first on describing present and past spatial characteristics of isolated backwaters. The number, area, and location of isolated backwaters, by size class, in five river reaches were quantified from maps representing conditions that existed in 1989 and 1890's. In 1989, isolated backwaters comprised between 1.9 and 3.8% of total mapped water in the reaches. In all reaches, the largest numbers of isolated backwater fell within the smallest (less than 1 ha) size classes. Cumulative area curves, however, indicated that isolated backwaters less than 2.9 ha in size made up less that 40, 31, 28, 27, and 18 percent of the total area of isolated water in Navigation Pools 4, 8, 13, 26, and the Open River, respectively. In Navigation Pools 4, 8, and 13, size frequency curves of isolated backwaters in 1890 were similar in pattern, but consistently lower, than those in 1989. In Navigation Pool 26 and the Open River, isolated backwaters in 1890 were too rare to support a general characterization of number or total area by size class. The lack of isolated backwaters in these reaches was likely related to the early conversion of floodplain land to agriculture. Patterns of size frequency and cumulative area by size class among the reaches suggest that these spatial variables may be consistent among other river reaches as well. However, the inverse relationship backwater number and size may present a potential dilemma for pool-scale water level management strategies that seek to affect a maximum number of isolated backwaters, versus those that seek to affect the greatest total area. Keywords: connectivity, Mississippi River, isolated backwaters, floodplain, ecosytem health